3D structure

PDB id
7NAC (explore in PDB, NAKB, or RNA 3D Hub)
Description
State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model
Experimental method
ELECTRON MICROSCOPY
Resolution
3.04 Å

Loop

Sequence
GAAAG*CUAGUAGC
Length
13 nucleotides
Bulged bases
7NAC|1|1|A|933, 7NAC|1|1|G|937
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NAC|1|1|G|805
7NAC|1|1|A|806
7NAC|1|1|A|807
7NAC|1|1|A|808
7NAC|1|1|G|809
*
7NAC|1|1|C|931
7NAC|1|1|U|932
7NAC|1|1|A|933
7NAC|1|1|G|934
7NAC|1|1|U|935
7NAC|1|1|A|936
7NAC|1|1|G|937
7NAC|1|1|C|938

Current chains

Chain 1
25S rRNA

Nearby chains

Chain 7
60S ribosomal subunit assembly/export protein LOC1
Chain C
60S ribosomal protein L4-A
Chain L
60S ribosomal protein L13-A
Chain j
60S ribosomal protein L37-A
Chain w
27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase

Coloring options:

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