IL_7NAC_073

3D structure

PDB id

7NAC (explore in PDB, NAKB, or RNA 3D Hub)

Description

State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

UGAC*GUAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NAC|1|1|U|2417
7NAC|1|1|G|2418
7NAC|1|1|A|2419
7NAC|1|1|C|2420
*
7NAC|1|1|G|2610
7NAC|1|1|U|2611
7NAC|1|1|A|2802
7NAC|1|1|A|2803

Current chains

Chain 1

25S rRNA

Nearby chains

Chain 7

60S ribosomal subunit assembly/export protein LOC1

Chain A

Ribosome biogenesis protein BRX1

Chain l

60S ribosome subunit biogenesis protein NIP7

Chain q

25S rRNA (cytosine(2870)-C(5))-methyltransferase