IL_7NAC_104

3D structure

PDB id

7NAC (explore in PDB, NAKB, or RNA 3D Hub)

Description

State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

GUAGAG*CGAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NAC|1|1|G|3340
7NAC|1|1|U|3341
7NAC|1|1|A|3342
7NAC|1|1|G|3343
7NAC|1|1|A|3344
7NAC|1|1|G|3345
*
7NAC|1|1|C|3360
7NAC|1|1|G|3361
7NAC|1|1|A|3362
7NAC|1|1|U|3363
7NAC|1|1|C|3364

Current chains

Chain 1

25S rRNA

Nearby chains

Chain u

Ribosome biogenesis protein RLP24

Chain w

27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase

Chain x

ATP-dependent rRNA helicase SPB4