IL_7NAR_060

3D structure

PDB id

7NAR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

G(4OC)CC*G(UR3)AAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 4OC, UR3

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NAR_060 not in the Motif Atlas

Geometric match to IL_4V88_464

Geometric discrepancy: 0.1525

The information below is about IL_4V88_464

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65718.1

Basepair signature

cWW-cSH-cWS-cWW-cWW

Number of instances in this motif group

5

Unit IDs

7NAR|1|A|G|1401
7NAR|1|A|4OC|1402
7NAR|1|A|C|1403
7NAR|1|A|C|1404
*
7NAR|1|A|G|1497
7NAR|1|A|UR3|1498
7NAR|1|A|A|1499
7NAR|1|A|A|1500
7NAR|1|A|C|1501

Current chains

Chain A

16S rRNA

Nearby chains

Chain W

Small ribosomal subunit biogenesis GTPase RsgA