IL_7NBU_050
3D structure
- PDB id
- 7NBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- GG*UCAUC
- Length
- 7 nucleotides
- Bulged bases
- 7NBU|1|A|C|1200, 7NBU|1|A|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NBU_050 not in the Motif Atlas
- Homologous match to IL_5J7L_048
- Geometric discrepancy: 0.1135
- The information below is about IL_5J7L_048
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_95583.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
7NBU|1|A|G|1057
7NBU|1|A|G|1058
*
7NBU|1|A|U|1199
7NBU|1|A|C|1200
7NBU|1|A|A|1201
7NBU|1|A|U|1202
7NBU|1|A|C|1203
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14
- Chain Y
- Probable endoribonuclease HigB1
Coloring options: