IL_7NBU_061
3D structure
- PDB id
- 7NBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 7NBU|1|A|C|1400, 7NBU|1|A|A|1503
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NBU_061 not in the Motif Atlas
- Homologous match to IL_5J7L_058
- Geometric discrepancy: 0.1233
- The information below is about IL_5J7L_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
7NBU|1|A|C|1399
7NBU|1|A|C|1400
7NBU|1|A|G|1401
*
7NBU|1|A|C|1501
7NBU|1|A|A|1502
7NBU|1|A|A|1503
7NBU|1|A|G|1504
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain E
- 30S ribosomal protein S5
- Chain V
- Transfer RNA; tRNA
- Chain X
- cspA mRNA
- Chain Y
- Probable endoribonuclease HigB1
Coloring options: