IL_7NFX_189
3D structure
- PDB id
- 7NFX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GACCU*AGC
- Length
- 8 nucleotides
- Bulged bases
- 7NFX|1|5|C|4349
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NFX_189 not in the Motif Atlas
- Geometric match to IL_8C3A_419
- Geometric discrepancy: 0.288
- The information below is about IL_8C3A_419
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47767.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
7NFX|1|5|G|4347
7NFX|1|5|A|4348
7NFX|1|5|C|4349
7NFX|1|5|C|4350
7NFX|1|5|U|4351
*
7NFX|1|5|A|4363
7NFX|1|5|G|4364
7NFX|1|5|C|4365
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain L
- 60S ribosomal protein L13
- Chain Q
- eL18
- Chain a
- uL15
- Chain o
- eL42
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