IL_7NHK_021

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NHK_021 not in the Motif Atlas

Geometric match to IL_5MWI_002

Geometric discrepancy: 0.0975

The information below is about IL_5MWI_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

7NHK|1|A|A|719
7NHK|1|A|U|720
7NHK|1|A|G|721
*
7NHK|1|A|C|834
7NHK|1|A|U|835
7NHK|1|A|U|836

Current chains

Chain A

23S rRNA

Nearby chains

Chain 6

50S ribosomal protein L34

Chain I

50S ribosomal protein L4