IL_7NHK_059

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAA*UGACG

Length

9 nucleotides

Bulged bases

7NHK|1|A|C|1599

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NHK_059 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.2055

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7NHK|1|A|C|1478
7NHK|1|A|U|1479
7NHK|1|A|A|1480
7NHK|1|A|A|1481
*
7NHK|1|A|U|1596
7NHK|1|A|G|1597
7NHK|1|A|A|1598
7NHK|1|A|C|1599
7NHK|1|A|G|1600

Current chains

Chain A

23S rRNA

Nearby chains