IL_7NHK_061

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAAG*UGACG

Length

9 nucleotides

Bulged bases

7NHK|1|A|C|1566

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NHK_061 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.2286

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7NHK|1|A|C|1510
7NHK|1|A|A|1511
7NHK|1|A|A|1512
7NHK|1|A|G|1513
*
7NHK|1|A|U|1563
7NHK|1|A|G|1564
7NHK|1|A|A|1565
7NHK|1|A|C|1566
7NHK|1|A|G|1567

Current chains

Chain A

23S rRNA

Nearby chains