IL_7NHK_064

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCGAAC*GAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NHK_064 not in the Motif Atlas

Homologous match to IL_4WF9_062

Geometric discrepancy: 0.1093

The information below is about IL_4WF9_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12566.5

Basepair signature

cWW-L-tHS-L-cWW-L

Number of instances in this motif group

6

Unit IDs

7NHK|1|A|G|1693
7NHK|1|A|C|1694
7NHK|1|A|G|1695
7NHK|1|A|A|1696
7NHK|1|A|A|1697
7NHK|1|A|C|1698
*
7NHK|1|A|G|2017
7NHK|1|A|A|2018
7NHK|1|A|C|2019

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L3

Chain Q

50S ribosomal protein L17