IL_7NHK_087
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUACAGGAUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHK_087 not in the Motif Atlas
- Homologous match to IL_3U4M_002
- Geometric discrepancy: 0.2479
- The information below is about IL_3U4M_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32056.1
- Basepair signature
- cWW-L-cWW-L-L-tWH-R-L-R-L
- Number of instances in this motif group
- 3
Unit IDs
7NHK|1|A|G|2123
7NHK|1|A|U|2124
7NHK|1|A|A|2125
7NHK|1|A|C|2126
7NHK|1|A|A|2127
7NHK|1|A|G|2128
7NHK|1|A|G|2129
7NHK|1|A|A|2130
7NHK|1|A|U|2131
7NHK|1|A|A|2132
7NHK|1|A|G|2133
*
7NHK|1|A|C|2191
7NHK|1|A|C|2192
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- ABC-F type ribosomal protection protein Lsa(A)
- Chain F
- 50S ribosomal protein L1
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