IL_7NHK_089
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAUGAGAC*GAGGAG
- Length
- 15 nucleotides
- Bulged bases
- 7NHK|1|A|U|2145
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHK_089 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.387
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7NHK|1|A|C|2142
7NHK|1|A|G|2143
7NHK|1|A|A|2144
7NHK|1|A|U|2145
7NHK|1|A|G|2146
7NHK|1|A|A|2147
7NHK|1|A|G|2148
7NHK|1|A|A|2149
7NHK|1|A|C|2150
*
7NHK|1|A|G|2167
7NHK|1|A|A|2168
7NHK|1|A|G|2169
7NHK|1|A|G|2170
7NHK|1|A|A|2171
7NHK|1|A|G|2172
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain F
- 50S ribosomal protein L1
Coloring options: