IL_7NHK_103
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 7NHK|1|A|G|2793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHK_103 not in the Motif Atlas
- Homologous match to IL_7RQB_102
- Geometric discrepancy: 0.0985
- The information below is about IL_7RQB_102
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.1
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7NHK|1|A|U|2649
7NHK|1|A|U|2650
7NHK|1|A|G|2651
7NHK|1|A|A|2652
7NHK|1|A|G|2653
*
7NHK|1|A|C|2787
7NHK|1|A|A|2788
7NHK|1|A|A|2789
7NHK|1|A|G|2790
7NHK|1|A|A|2791
7NHK|1|A|U|2792
7NHK|1|A|G|2793
7NHK|1|A|A|2794
7NHK|1|A|G|2795
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain H
- 50S ribosomal protein L3
- Chain M
- 50S ribosomal protein L13
Coloring options: