IL_7NHK_127
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 7NHK|1|a|U|190
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHK_127 not in the Motif Atlas
- Homologous match to IL_5J7L_012
- Geometric discrepancy: 0.1219
- The information below is about IL_5J7L_012
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7NHK|1|a|G|164
7NHK|1|a|G|165
7NHK|1|a|A|166
7NHK|1|a|U|167
7NHK|1|a|A|168
7NHK|1|a|A|169
7NHK|1|a|C|170
*
7NHK|1|a|G|185
7NHK|1|a|C|186
7NHK|1|a|U|187
7NHK|1|a|A|188
7NHK|1|a|A|189
7NHK|1|a|U|190
7NHK|1|a|A|191
7NHK|1|a|C|192
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain u
- 30S ribosomal protein S20
Coloring options: