IL_7NHL_086
3D structure
- PDB id
- 7NHL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAG*CGCUGGUGGGAUAC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHL_086 not in the Motif Atlas
- Homologous match to IL_3U4M_003
- Geometric discrepancy: 0.1996
- The information below is about IL_3U4M_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75283.2
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
- Number of instances in this motif group
- 3
Unit IDs
7NHL|1|A|G|2151
7NHL|1|A|G|2152
7NHL|1|A|A|2153
7NHL|1|A|G|2154
*
7NHL|1|A|C|2188
7NHL|1|A|G|2189
7NHL|1|A|C|2190
7NHL|1|A|U|2191
7NHL|1|A|G|2192
7NHL|1|A|G|2193
7NHL|1|A|U|2194
7NHL|1|A|G|2195
7NHL|1|A|G|2196
7NHL|1|A|G|2197
7NHL|1|A|A|2198
7NHL|1|A|U|2199
7NHL|1|A|A|2200
7NHL|1|A|C|2201
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- Lincosamide-streptogramin A resistance protein
Coloring options: