IL_7NHL_103
3D structure
- PDB id
- 7NHL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHL_103 not in the Motif Atlas
- Geometric match to IL_7RQB_103
- Geometric discrepancy: 0.1393
- The information below is about IL_7RQB_103
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.1
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
7NHL|1|A|U|2679
7NHL|1|A|U|2680
7NHL|1|A|A|2681
7NHL|1|A|G|2682
7NHL|1|A|U|2683
7NHL|1|A|A|2684
7NHL|1|A|C|2685
*
7NHL|1|A|G|2690
7NHL|1|A|G|2691
7NHL|1|A|A|2692
7NHL|1|A|C|2693
7NHL|1|A|C|2694
7NHL|1|A|G|2695
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L6
Coloring options: