IL_7NHL_170
3D structure
- PDB id
- 7NHL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UACAAAG*CAUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7NHL|1|a|U|1297
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHL_170 not in the Motif Atlas
- Homologous match to IL_5J7L_054
- Geometric discrepancy: 0.1489
- The information below is about IL_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.2
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7NHL|1|a|U|1258
7NHL|1|a|A|1259
7NHL|1|a|C|1260
7NHL|1|a|A|1261
7NHL|1|a|A|1262
7NHL|1|a|A|1263
7NHL|1|a|G|1264
*
7NHL|1|a|C|1295
7NHL|1|a|A|1296
7NHL|1|a|U|1297
7NHL|1|a|A|1298
7NHL|1|a|A|1299
7NHL|1|a|A|1300
7NHL|1|a|G|1301
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain h
- 30S ribosomal protein S7
- Chain j
- 30S ribosomal protein S9
- Chain k
- 30S ribosomal protein S10
- Chain o
- 30S ribosomal protein S14 type Z
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