IL_7NHM_057

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUAG*UGAUU

Length

9 nucleotides

Bulged bases

7NHM|1|A|U|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NHM_057 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.1135

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7NHM|1|A|A|1481
7NHM|1|A|U|1482
7NHM|1|A|A|1483
7NHM|1|A|G|1484
*
7NHM|1|A|U|1598
7NHM|1|A|G|1599
7NHM|1|A|A|1600
7NHM|1|A|U|1601
7NHM|1|A|U|1602

Current chains

Chain A

23S rRNA

Nearby chains