IL_7NHM_058

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

7NHM|1|A|U|1568

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NHM_058 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.1072

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7NHM|1|A|U|1512
7NHM|1|A|A|1513
7NHM|1|A|A|1514
7NHM|1|A|G|1515
*
7NHM|1|A|U|1565
7NHM|1|A|G|1566
7NHM|1|A|A|1567
7NHM|1|A|U|1568
7NHM|1|A|G|1569

Current chains

Chain A

23S rRNA

Nearby chains