IL_7NHM_060

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UG*CGUUAAG

Length

9 nucleotides

Bulged bases

7NHM|1|A|U|1552

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NHM_060 not in the Motif Atlas

Homologous match to IL_7RQB_061

Geometric discrepancy: 0.3902

The information below is about IL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52493.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7NHM|1|A|U|1525
7NHM|1|A|G|1526
*
7NHM|1|A|C|1549
7NHM|1|A|G|1550
7NHM|1|A|U|1551
7NHM|1|A|U|1552
7NHM|1|A|A|1553
7NHM|1|A|A|1554
7NHM|1|A|G|1555

Current chains

Chain A

23S rRNA

Nearby chains