IL_7NHM_096
3D structure
- PDB id
- 7NHM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UG*CAAG
- Length
- 6 nucleotides
- Bulged bases
- 7NHM|1|A|A|2569
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHM_096 not in the Motif Atlas
- Homologous match to IL_5J7L_342
- Geometric discrepancy: 0.1132
- The information below is about IL_5J7L_342
- Detailed Annotation
- Major groove platform with intercalation
- Broad Annotation
- Major groove platform
- Motif group
- IL_02555.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
7NHM|1|A|U|2549
7NHM|1|A|G|2550
*
7NHM|1|A|C|2567
7NHM|1|A|A|2568
7NHM|1|A|A|2569
7NHM|1|A|G|2570
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 9
- 50S ribosomal protein L36
- Chain M
- 50S ribosomal protein L13
Coloring options: