IL_7NHM_167
3D structure
- PDB id
- 7NHM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGAUU*AUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHM_167 not in the Motif Atlas
- Geometric match to IL_4LFB_055
- Geometric discrepancy: 0.1266
- The information below is about IL_4LFB_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85536.2
- Basepair signature
- cWW-tSH-L-R-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
7NHM|1|a|C|1314
7NHM|1|a|G|1315
7NHM|1|a|G|1316
7NHM|1|a|A|1317
7NHM|1|a|U|1318
7NHM|1|a|U|1319
*
7NHM|1|a|A|1340
7NHM|1|a|U|1341
7NHM|1|a|G|1342
7NHM|1|a|A|1343
7NHM|1|a|A|1344
7NHM|1|a|G|1345
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain n
- 30S ribosomal protein S13
Coloring options: