IL_7NHM_168
3D structure
- PDB id
- 7NHM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 7NHM|1|a|C|1411, 7NHM|1|a|A|1515
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHM_168 not in the Motif Atlas
- Homologous match to IL_5J7L_058
- Geometric discrepancy: 0.1349
- The information below is about IL_5J7L_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
7NHM|1|a|C|1410
7NHM|1|a|C|1411
7NHM|1|a|G|1412
*
7NHM|1|a|C|1513
7NHM|1|a|A|1514
7NHM|1|a|A|1515
7NHM|1|a|G|1516
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain b
- RNA (5'-R(P*GP*GP*AP*GP*GP*UP*NP*NP*NP*NP*NP*NP*AP*UP*G)-3')
- Chain f
- 30S ribosomal protein S5
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