IL_7NHN_077
3D structure
- PDB id
- 7NHN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCCG
- Length
- 16 nucleotides
- Bulged bases
- 7NHN|1|A|A|1971, 7NHN|1|A|U|1977, 7NHN|1|A|C|1996
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHN_077 not in the Motif Atlas
- Homologous match to IL_4WF9_077
- Geometric discrepancy: 0.1275
- The information below is about IL_4WF9_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84014.2
- Basepair signature
- cWW-L-tHH-cHW-cWW-L-L-tSW-L
- Number of instances in this motif group
- 9
Unit IDs
7NHN|1|A|C|1967
7NHN|1|A|G|1968
7NHN|1|A|A|1969
7NHN|1|A|A|1970
7NHN|1|A|A|1971
7NHN|1|A|U|1972
7NHN|1|A|U|1973
7NHN|1|A|C|1974
7NHN|1|A|C|1975
7NHN|1|A|U|1976
7NHN|1|A|U|1977
7NHN|1|A|G|1978
*
7NHN|1|A|C|1994
7NHN|1|A|C|1995
7NHN|1|A|C|1996
7NHN|1|A|G|1997
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- Lmo0919 protein
- Chain D
- Transfer RNA; tRNA
- Chain G
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: