IL_7NQH_034
3D structure
- PDB id
- 7NQH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CC*GAACAAUAG
- Length
- 11 nucleotides
- Bulged bases
- 7NQH|1|AA|A|644, 7NQH|1|AA|A|647
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NQH_034 not in the Motif Atlas
- Geometric match to IL_8S95_001
- Geometric discrepancy: 0.257
- The information below is about IL_8S95_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25652.1
- Basepair signature
- cWW-tSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7NQH|1|AA|C|633
7NQH|1|AA|C|634
*
7NQH|1|AA|G|643
7NQH|1|AA|A|644
7NQH|1|AA|A|645
7NQH|1|AA|C|646
7NQH|1|AA|A|647
7NQH|1|AA|A|648
7NQH|1|AA|U|649
7NQH|1|AA|A|650
7NQH|1|AA|G|651
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AB
- Mitochondrial ribosomal protein S2
- Chain AE
- Mitochondrial ribosomal protein S5
- Chain AF
- bS6m
- Chain AI
- uS9m
- Chain AU
- bS21m
- Chain Ab
- mS23
- Chain Am
- mS37
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