IL_7NQH_064

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAG*CAUC

Length

8 nucleotides

Bulged bases

7NQH|1|BA|A|506

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQH_064 not in the Motif Atlas

Geometric match to IL_5D8H_002

Geometric discrepancy: 0.1329

The information below is about IL_5D8H_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28482.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

7NQH|1|BA|G|504
7NQH|1|BA|U|505
7NQH|1|BA|A|506
7NQH|1|BA|G|507
*
7NQH|1|BA|C|521
7NQH|1|BA|A|522
7NQH|1|BA|U|523
7NQH|1|BA|C|524

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BK

Mitochondrial ribosomal protein L11

Chain BQ

uL16m

Chain Bq

mL54