IL_7NQH_102

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAUAAU*AUUAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQH_102 not in the Motif Atlas

Geometric match to IL_4QLM_002

Geometric discrepancy: 0.3654

The information below is about IL_4QLM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74322.2

Basepair signature

cWW-tSH-L-R-L-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

7NQH|1|BA|G|1507
7NQH|1|BA|A|1508
7NQH|1|BA|U|1509
7NQH|1|BA|A|1510
7NQH|1|BA|A|1511
7NQH|1|BA|U|1512
*
7NQH|1|BA|A|1534
7NQH|1|BA|U|1535
7NQH|1|BA|U|1536
7NQH|1|BA|A|1537
7NQH|1|BA|A|1538
7NQH|1|BA|C|1539

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B9

Ribosomal protein

Chain BN

uL13m

Chain Bx

Mitochondrial ribosomal protein S18A