IL_7NQL_015
3D structure
- PDB id
- 7NQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUGCCAG*CGGUCAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7NQL|1|AA|U|257, 7NQL|1|AA|U|260, 7NQL|1|AA|A|261
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NQL_015 not in the Motif Atlas
- Homologous match to IL_4LFB_021
- Geometric discrepancy: 0.4827
- The information below is about IL_4LFB_021
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_52042.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7NQL|1|AA|G|241
7NQL|1|AA|U|242
7NQL|1|AA|G|243
7NQL|1|AA|C|244
7NQL|1|AA|C|245
7NQL|1|AA|A|246
7NQL|1|AA|G|247
*
7NQL|1|AA|C|254
7NQL|1|AA|G|255
7NQL|1|AA|G|256
7NQL|1|AA|U|257
7NQL|1|AA|C|258
7NQL|1|AA|A|259
7NQL|1|AA|U|260
7NQL|1|AA|A|261
7NQL|1|AA|C|262
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AE
- Mitochondrial ribosomal protein S5
- Chain AL
- Mitochondrial ribosomal protein S12
- Chain Ai
- mS33
- Chain BL
- Peptidyl-tRNA hydrolase ICT1, mitochondrial
Coloring options: