IL_7NQL_023
3D structure
- PDB id
- 7NQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUACUACUCG*CCUAAAAC
- Length
- 18 nucleotides
- Bulged bases
- 7NQL|1|AA|C|494
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NQL_023 not in the Motif Atlas
- Geometric match to IL_6UFH_002
- Geometric discrepancy: 0.3808
- The information below is about IL_6UFH_002
- Detailed Annotation
- 10x8 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_22278.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-R-L-cWW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
7NQL|1|AA|G|491
7NQL|1|AA|U|492
7NQL|1|AA|A|493
7NQL|1|AA|C|494
7NQL|1|AA|U|495
7NQL|1|AA|A|496
7NQL|1|AA|C|497
7NQL|1|AA|U|498
7NQL|1|AA|C|499
7NQL|1|AA|G|500
*
7NQL|1|AA|C|507
7NQL|1|AA|C|508
7NQL|1|AA|U|509
7NQL|1|AA|A|510
7NQL|1|AA|A|511
7NQL|1|AA|A|512
7NQL|1|AA|A|513
7NQL|1|AA|C|514
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AL
- Mitochondrial ribosomal protein S12
- Chain AO
- uS15m
- Chain An
- Aurora kinase A interacting protein 1
Coloring options: