IL_7NQL_045
3D structure
- PDB id
- 7NQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUUG*CUUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NQL_045 not in the Motif Atlas
- Geometric match to IL_5TBW_128
- Geometric discrepancy: 0.2004
- The information below is about IL_5TBW_128
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7NQL|1|AV|G|45
7NQL|1|AV|U|46
7NQL|1|AV|U|47
7NQL|1|AV|G|48
*
7NQL|1|AV|C|57
7NQL|1|AV|U|58
7NQL|1|AV|U|59
7NQL|1|AV|C|60
Current chains
- Chain AV
- fMet-tRNAMet (P site)
Nearby chains
- Chain B0
- Mitochondrial ribosomal protein L27
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BQ
- uL16m
- Chain Bd
- Mitochondrial ribosomal protein L40
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