IL_7NQL_064

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUAG*CAUC

Length

8 nucleotides

Bulged bases

7NQL|1|BA|A|506

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQL_064 not in the Motif Atlas

Homologous match to IL_5J7L_285

Geometric discrepancy: 0.2012

The information below is about IL_5J7L_285

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92446.2

Basepair signature

cWW-cWW-R-L-L

Number of instances in this motif group

5

Unit IDs

7NQL|1|BA|G|504
7NQL|1|BA|U|505
7NQL|1|BA|A|506
7NQL|1|BA|G|507
*
7NQL|1|BA|C|521
7NQL|1|BA|A|522
7NQL|1|BA|U|523
7NQL|1|BA|C|524

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BK

Mitochondrial ribosomal protein L11

Chain BQ

uL16m

Chain Bq

mL54