IL_7NQL_091

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQL_091 not in the Motif Atlas

Geometric match to IL_4V9F_082

Geometric discrepancy: 0.1142

The information below is about IL_4V9F_082

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.9

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

44

Unit IDs

7NQL|1|BA|G|1277
7NQL|1|BA|C|1278
*
7NQL|1|BA|G|1319
7NQL|1|BA|A|1320
7NQL|1|BA|C|1321

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BE

ICT1

Chain BL

Peptidyl-tRNA hydrolase ICT1, mitochondrial

Chain BQ

uL16m

Chain Bt

Mitochondrial ribosomal protein L57