IL_7NQL_095

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UG*UGA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQL_095 not in the Motif Atlas

Homologous match to IL_7RQB_096

Geometric discrepancy: 0.1579

The information below is about IL_7RQB_096

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_76223.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

10

Unit IDs

7NQL|1|BA|U|1330
7NQL|1|BA|G|1331
*
7NQL|1|BA|U|1403
7NQL|1|BA|G|1404
7NQL|1|BA|A|1405

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BE

ICT1

Chain BL

Peptidyl-tRNA hydrolase ICT1, mitochondrial