IL_7NQL_101

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCAAC*GCG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQL_101 not in the Motif Atlas

Geometric match to IL_4JRC_003

Geometric discrepancy: 0.1928

The information below is about IL_4JRC_003

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.12

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

22

Unit IDs

7NQL|1|BA|C|1483
7NQL|1|BA|C|1484
7NQL|1|BA|A|1485
7NQL|1|BA|A|1486
7NQL|1|BA|C|1487
*
7NQL|1|BA|G|1497
7NQL|1|BA|C|1498
7NQL|1|BA|G|1499

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BE

ICT1

Chain BO

uL14m

Chain BT

Mitochondrial ribosomal protein L19