IL_7NRC_002
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- 7NRC|1|LC|C|151
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_002 not in the Motif Atlas
- Homologous match to IL_5TBW_002
- Geometric discrepancy: 0.1172
- The information below is about IL_5TBW_002
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.13
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 40
Unit IDs
7NRC|1|LA|C|7
7NRC|1|LA|C|8
*
7NRC|1|LC|G|150
7NRC|1|LC|C|151
7NRC|1|LC|G|152
Current chains
- Chain LA
- 25S rRNA (3184-MER)
- Chain LC
- 5.8S rRNA (158-MER)
Nearby chains
- Chain LJ
- 60S ribosomal protein L8-A
- Chain LP
- 60S ribosomal protein L15-A
- Chain LZ
- 60S ribosomal protein L25
Coloring options: