IL_7NRC_137
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AGAG*CGAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_137 not in the Motif Atlas
- Homologous match to IL_8C3A_141
- Geometric discrepancy: 0.1458
- The information below is about IL_8C3A_141
- Detailed Annotation
- Double sheared; A in syn
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.12
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 35
Unit IDs
7NRC|1|LA|A|3342
7NRC|1|LA|G|3343
7NRC|1|LA|A|3344
7NRC|1|LA|G|3345
*
7NRC|1|LA|C|3360
7NRC|1|LA|G|3361
7NRC|1|LA|A|3362
7NRC|1|LA|U|3363
Current chains
- Chain LA
- 25S rRNA (3184-MER)
Nearby chains
- Chain LT
- 60S ribosomal protein L19-A
- Chain LW
- 60S ribosomal protein L22-A
- Chain LY
- 60S ribosomal protein L24-A
- Chain SV
- 40S ribosomal protein S8-A
Coloring options: