IL_7NRC_147
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UAA*UCGA
- Length
- 7 nucleotides
- Bulged bases
- 7NRC|1|LC|G|95
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_147 not in the Motif Atlas
- Geometric match to IL_5TBW_145
- Geometric discrepancy: 0.112
- The information below is about IL_5TBW_145
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_54650.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
7NRC|1|LC|U|64
7NRC|1|LC|A|65
7NRC|1|LC|A|66
*
7NRC|1|LC|U|93
7NRC|1|LC|C|94
7NRC|1|LC|G|95
7NRC|1|LC|A|96
Current chains
- Chain LC
- 5.8S rRNA (158-MER)
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain La
- 60S ribosomal protein L26-A
- Chain Lj
- 60S ribosomal protein L35-A
- Chain Ll
- 60S ribosomal protein L37-A
Coloring options: