IL_7NRC_152
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAUUAAG*CGC
- Length
- 10 nucleotides
- Bulged bases
- 7NRC|1|S2|U|45, 7NRC|1|S2|A|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_152 not in the Motif Atlas
- Homologous match to IL_4V88_387
- Geometric discrepancy: 0.1486
- The information below is about IL_4V88_387
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77761.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
7NRC|1|S2|G|42
7NRC|1|S2|A|43
7NRC|1|S2|U|44
7NRC|1|S2|U|45
7NRC|1|S2|A|46
7NRC|1|S2|A|47
7NRC|1|S2|G|48
*
7NRC|1|S2|C|431
7NRC|1|S2|G|432
7NRC|1|S2|C|433
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain Sc
- 40S ribosomal protein S23-A
- Chain So
- Ribosome-interacting GTPase 2
Coloring options: