IL_7NRC_159
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UAUAAC*GCUAAUA
- Length
- 13 nucleotides
- Bulged bases
- 7NRC|1|S2|U|170
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_159 not in the Motif Atlas
- Geometric match to IL_4LFB_009
- Geometric discrepancy: 0.1854
- The information below is about IL_4LFB_009
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_12745.1
- Basepair signature
- cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7NRC|1|S2|U|144
7NRC|1|S2|A|145
7NRC|1|S2|U|146
7NRC|1|S2|A|147
7NRC|1|S2|A|148
7NRC|1|S2|C|149
*
7NRC|1|S2|G|165
7NRC|1|S2|C|166
7NRC|1|S2|U|167
7NRC|1|S2|A|168
7NRC|1|S2|A|169
7NRC|1|S2|U|170
7NRC|1|S2|A|171
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain ST
- 40S ribosomal protein S6-A
- Chain Sd
- 40S ribosomal protein S24-A
Coloring options: