IL_7NRC_192
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGA*UUUU
- Length
- 7 nucleotides
- Bulged bases
- 7NRC|1|S2|U|959
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_192 not in the Motif Atlas
- Geometric match to IL_4P3T_005
- Geometric discrepancy: 0.1937
- The information below is about IL_4P3T_005
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_10289.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 237
Unit IDs
7NRC|1|S2|G|867
7NRC|1|S2|G|868
7NRC|1|S2|A|869
*
7NRC|1|S2|U|958
7NRC|1|S2|U|959
7NRC|1|S2|U|960
7NRC|1|S2|U|961
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain SY
- 40S ribosomal protein S13
- Chain Sf
- 40S ribosomal protein S27-A
Coloring options: