IL_7NRC_221
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUG*UUAUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_221 not in the Motif Atlas
- Homologous match to IL_8C3A_464
- Geometric discrepancy: 0.4531
- The information below is about IL_8C3A_464
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
7NRC|1|S2|G|1352
7NRC|1|S2|U|1353
7NRC|1|S2|G|1354
*
7NRC|1|S2|U|1369
7NRC|1|S2|U|1370
7NRC|1|S2|A|1371
7NRC|1|S2|U|1372
7NRC|1|S2|C|1373
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain SF
- 40S ribosomal protein S16-A
- Chain SI
- 40S ribosomal protein S19-A
- Chain SJ
- 40S ribosomal protein S20
Coloring options: