IL_7NRC_227
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 7NRC|1|S2|C|1637, 7NRC|1|S2|A|1766
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_227 not in the Motif Atlas
- Geometric match to IL_4V88_463
- Geometric discrepancy: 0.1568
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
7NRC|1|S2|C|1636
7NRC|1|S2|C|1637
7NRC|1|S2|G|1638
*
7NRC|1|S2|C|1764
7NRC|1|S2|A|1765
7NRC|1|S2|A|1766
7NRC|1|S2|G|1767
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain Se
- 40S ribosomal protein S26-B
- Chain Sl
- RNA (5'-R(P*AP*UP*GP*AP*AP*A)-3')
- Chain Sn
- Transfer RNA; tRNA
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