IL_7NRC_251
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGU*GAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_251 not in the Motif Atlas
- Geometric match to IL_2R8S_001
- Geometric discrepancy: 0.158
- The information below is about IL_2R8S_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7NRC|1|S2|G|871
7NRC|1|S2|G|872
7NRC|1|S2|U|873
*
7NRC|1|S2|G|954
7NRC|1|S2|A|955
7NRC|1|S2|C|956
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain SQ
- 40S ribosomal protein S1-A
- Chain SY
- 40S ribosomal protein S13
- Chain Sf
- 40S ribosomal protein S27-A
Coloring options: