IL_7NSI_030
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- CG*UCAAG
- Length
- 7 nucleotides
- Bulged bases
- 7NSI|1|AA|C|685, 7NSI|1|AA|A|686
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NSI_030 not in the Motif Atlas
- Homologous match to IL_6CZR_155
- Geometric discrepancy: 0.2672
- The information below is about IL_6CZR_155
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_95583.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
7NSI|1|AA|C|617
7NSI|1|AA|G|618
*
7NSI|1|AA|U|684
7NSI|1|AA|C|685
7NSI|1|AA|A|686
7NSI|1|AA|A|687
7NSI|1|AA|G|688
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AC
- 28S ribosomal protein S24, mitochondrial
- Chain AE
- 28S ribosomal protein S5, mitochondrial isoform X2
- Chain AJ
- 28S ribosomal protein S10, mitochondrial
- Chain AN
- 28S ribosomal protein S14, mitochondrial
- Chain Ai
- Mitochondrial ribosomal protein S33
Coloring options: