IL_7NSI_036

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7NSI|1|AA|C|844, 7NSI|1|AA|A|929

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSI_036 not in the Motif Atlas

Geometric match to IL_5J7L_058

Geometric discrepancy: 0.1639

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

7NSI|1|AA|C|843
7NSI|1|AA|C|844
7NSI|1|AA|G|845
*
7NSI|1|AA|C|927
7NSI|1|AA|A|928
7NSI|1|AA|A|929
7NSI|1|AA|G|930

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AV

tRNA (P/E)

Chain AX

mRNA

Chain An

Aurora kinase A interacting protein 1