IL_7NSI_048
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- AAAGUAU*AGAAAU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NSI_048 not in the Motif Atlas
- Geometric match to IL_5J7L_251
- Geometric discrepancy: 0.1587
- The information below is about IL_5J7L_251
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_26307.2
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
7NSI|1|BA|A|73
7NSI|1|BA|A|74
7NSI|1|BA|A|75
7NSI|1|BA|G|76
7NSI|1|BA|U|77
7NSI|1|BA|A|78
7NSI|1|BA|U|79
*
7NSI|1|BA|A|87
7NSI|1|BA|G|88
7NSI|1|BA|A|89
7NSI|1|BA|A|90
7NSI|1|BA|A|91
7NSI|1|BA|U|92
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B1
- 39S ribosomal protein L28, mitochondrial
- Chain B8
- 39S ribosomal protein L35, mitochondrial
- Chain BI
- 39S ribosomal protein L9, mitochondrial
- Chain BP
- 39S ribosomal protein L15, mitochondrial
- Chain Bn
- 39S ribosomal protein L51, mitochondrial
- Chain Bv
- 39S ribosomal protein L59, mitochondrial
Coloring options: