IL_7NSI_050
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- AAC*GCU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NSI_050 not in the Motif Atlas
- Geometric match to IL_3MEI_002
- Geometric discrepancy: 0.1431
- The information below is about IL_3MEI_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.5
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 238
Unit IDs
7NSI|1|BA|A|214
7NSI|1|BA|A|215
7NSI|1|BA|C|216
*
7NSI|1|BA|G|230
7NSI|1|BA|C|231
7NSI|1|BA|U|232
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B8
- 39S ribosomal protein L35, mitochondrial
- Chain BF
- Mitochondrial ribosomal protein L4
- Chain BP
- 39S ribosomal protein L15, mitochondrial
- Chain Bb
- 39S ribosomal protein L38, mitochondrial
- Chain Bl
- 39S ribosomal protein L49, mitochondrial
- Chain Bt
- Mitochondrial ribosomal protein L57
Coloring options: