IL_7NSI_054

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GAC*GCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSI_054 not in the Motif Atlas

Geometric match to IL_3GM7_006

Geometric discrepancy: 0.1441

The information below is about IL_3GM7_006

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

7NSI|1|BA|G|249
7NSI|1|BA|A|250
7NSI|1|BA|C|251
*
7NSI|1|BA|G|341
7NSI|1|BA|C|342
7NSI|1|BA|C|343

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B7

39S ribosomal protein L34, mitochondrial

Chain BF

Mitochondrial ribosomal protein L4