IL_7NSI_058
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- GAG*CUAAC
- Length
- 8 nucleotides
- Bulged bases
- 7NSI|1|BA|A|323, 7NSI|1|BA|U|335, 7NSI|1|BA|A|336, 7NSI|1|BA|A|337
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NSI_058 not in the Motif Atlas
- Homologous match to IL_5J7L_265
- Geometric discrepancy: 0.11
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7NSI|1|BA|G|322
7NSI|1|BA|A|323
7NSI|1|BA|G|324
*
7NSI|1|BA|C|334
7NSI|1|BA|U|335
7NSI|1|BA|A|336
7NSI|1|BA|A|337
7NSI|1|BA|C|338
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B7
- 39S ribosomal protein L34, mitochondrial
- Chain BD
- Ribosomal_L2_C domain-containing protein
- Chain BF
- Mitochondrial ribosomal protein L4
- Chain BW
- 39S ribosomal protein L22, mitochondrial
- Chain Bi
- Mitochondrial ribosomal protein L45
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